BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D01LP1|AL428706
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1492 1670 0.0
>3x_Contig1492
Length = 8701
Score = 1670 bits (842), Expect = 0.0
Identities = 867/872 (99%), Gaps = 3/872 (0%)
Strand = Plus / Plus
Query: 1 tagtaggagaaaggttaaaatctgtgagtgatttttaactgtgatgaaatttacaattca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4393 tagtaggagaaaggttaaaatctgtgagttatttttaactgtgatgaaatttacaattca 4452
Query: 61 tcagcgaaaggtagcttagcgacgttacctacagcggcgtaagagaatttgtccaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4453 tcagcgaaaggtagcttagcgacgttacctacagcggcgtaagagaatttgtccaacttg 4512
Query: 121 acattcttgacattagagacatcgattggagcgttttccaaagataattgcaaggcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4513 acattcttgacattagagacatcgattggagcgttttccaaagataattgcaaggcagtg 4572
Query: 181 tattccttagcagctgaaatgtcgacatccttcttcaaggtatcaacgaccttctttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4573 tattccttagcagctgaaatgtcgacatccttcttcaaggtatcaacgaccttctttatg 4632
Query: 241 ttttcagcaacgacagaagcatcctcacccttgacgtataaagagaacaagccggcatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4633 ttttcagcaacgacagaagcatcctcacccttgacgtataaagagaacaagccggcatta 4692
Query: 301 gcgtacttgtctaacttagctgagtcaattaatggagacaattcggacaaagcagaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4693 gcgtacttgtctaacttagctgagtcaattaatggagacaattcggacaaagcagaggtt 4752
Query: 361 aggtacttagccaagacttcgtaggtagcgaactgttccttagtaactggaacagcgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4753 aggtacttagccaagacttcgtaggtagcgaactgttccttagtaactggaacagcgata 4812
Query: 421 gcggcaacggaggcacctggagcacttaatctggcttcaccggagaagaactttggttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4813 gcggcaacggaggcacctggagcacttaatctggcttcaccggagaagaactttggttga 4872
Query: 481 gcttgagcagccaacttggagccagttggtaaagaaccaatcaaagagtcgttgacaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4873 gcttgagcagccaacttggagccagttggtaaagaaccaatcaaagagtcgttgacaaat 4932
Query: 541 ctcttcaagtcagcttcgttgacaccttgaccaacaatttcaatgttttccttggtgtag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4933 ctcttcaagtcagcttcgttgacaccttgaccaacaatttcaatgttttccttggtgtag 4992
Query: 601 accttgttggcataagccttgatatcatccaaggtgaccttctcgacacctctgtataga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4993 accttgttggcataagccttgatatcatccaaggtgaccttctcgacacctctgtataga 5052
Query: 661 actgtgttacctaagtcctttctgaaagagacattgtaaagtaagtcttcggccttgttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5053 actgtgttacctaagtcctttctgaaagagacattgtaaagtaagtcttcggccttgttg 5112
Query: 721 attgggttagtttcagaaacggaaatgtcgtacttagcagctggcaagacagattctggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5113 attgggttagtttcagaaacggaaatgtcgtacttagcagctggcaagacagattctggt 5172
Query: 781 aattcgtggggtctgaaactggtcttgtacaaaacgtta-cccaaagcgttaacg-arta 838
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct: 5173 aattcgtggggtctgaaactggtcttgtacaaaacgttaccccaaagcgttaacgaagta 5232
Query: 839 tgggaagatcttccttcaagaaagtagccttc 870
| ||||||||||||||||||||||||||||||
Sbjct: 5233 t-ggaagatcttccttcaagaaagtagccttc 5263
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5894
Number of Sequences: 1807
Number of extensions: 5894
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)